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CorneaMD: A Multiomics Database for Corneal Diseases

  GSE156272
  Publication
Core transcription regulatory circuitry orchestrates corneal epithelial homeostasis
  Species
Human
  Source
Primary limbal stem cells
  Condition
Normal tissue
  Technology
ChIP-seq
  Groups
H3K27ac (ChIP-seq for H3K27ac in human limbal stem cells, n = 2); H3K4me1 (ChIP-seq for H3K4me1 in human limbal stem cells, n = 2); H3K4me3 (ChIP-seq for H3K4me3 in human limbal stem cells, n = 2); H3K27me3 (ChIP-seq for H3K27me3 in human limbal stem cells, n = 2); RUNX1 (ChIP-seq for RUNX1 in human limbal stem cells, n = 2); PAX6 (ChIP-seq for PAX6 in human limbal stem cells, n = 2); SMAD3 (ChIP-seq for SMAD3 in human limbal stem cells, n = 2); scr_H3K27ac (ChIP-seq for scr_H3K27ac in human limbal stem cells, n = 2); scr_H3K4me1 (ChIP-seq for scr_H3K4me1 in human limbal stem cells, n = 2); scr_H3K4me3 (ChIP-seq for scr_H3K4me3 in human limbal stem cells, n = 2); scr_H3K27me3 (ChIP-seq for scr_H3K27me3 in human limbal stem cells, n = 2); shRUNX1_H3K27ac (ChIP-seq for shRUNX1_H3K27ac in human limbal stem cells, n = 2); shRUNX1_H3K4me1 (ChIP-seq for shRUNX1_H3K4me1 in human limbal stem cells, n = 2); shRUNX1_H3K4me3 (ChIP-seq for shRUNX1_H3K4me3 in human limbal stem cells, n = 2); shRUNX1_H3K27me3 (ChIP-seq for shRUNX1_H3K27me3 in human limbal stem cells, n = 2).
  Citation
Collin, Joseph et al. "A single cell atlas of human cornea that defines its development, limbal progenitor cells and their interactions with the immune cells." The ocular surface vol. 21 (2021): 21. doi:10.1016/j.jtos.2021.03.010
Differential peaks for selected histone
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